STR chr3:135916825-135916841

Repeat unit A/T repeats 17 times in the reference sequence.


...TATTAAGCAGTAAGAATATAACTTCCTAATTTTGATTAGCTGTGCAAACTGTATTTGGTTGTCTTATACGTGGAAAATGACAAATATTCTAAAAGCCACT
CTCATTTTTAAAAGCTCTCT
TTTTTTTTTTTTTTTTGCATAAGAGATCTTTTCTAAGCTCTCCTTCAAATAAAATTGTTACACGGTTCTATTTTTACTCC
AGACTCTAAGGTCTTCTCCCACAACACAGAGGTGGTTCTCCCCAAAAGGAGCAACA
...

No gene information available

No sequence data available.

Parameter Value
Mutation model: Mutation rate 3.19e-04
Mutation model: Beta 0.261
Mutation model: P(single step) 1.000
Constraint (Z-score) 0.000
Stutter model: up 0.042
Stutter model: down 0.091
Stutter model: p 0.816
See the about page for a detailed description of each parameter.

Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.97
SSC - r 0.97
1000 (EUR) - Concordance 0.96
1000G (EUR) - r 0.98
1000 (AFR) - Concordance 0.89
1000G (AFR) - r 0.65
1000 (EAS) - Concordance 0.96
1000G (EAS) - r 0.91

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-2 0.76 7.205e-301
-1 0.96 0.000e+00
0 0.93 0.000e+00
1 0.77 1.750e-302
2 0.92 0.000e+00
3 nan 1.000e+00
6 1.00 0.000e+00
See the about page for a detailed description of each parameter.