STR chr22:46191235-46191304

Motif AATAG repeats 14 times in the reference sequence.


...AGAACAAAGAATAGTGAAGACAAATAGAAAACAGATGGCAGAATGATAAACTCAATCATGTTGATAAATATATTAAATGTAAATGGCTTAAATATCCAAC
TAAAAGACTACTAGAATGGA
TTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTTTTTGAGATGA
AGTCTCTCTATGTTGCCCAGGCTGGAGTGCAGTGGCGCGATCTCAGCTCACTGCAACCTCTGCCTACCAGGTTCAAGCAATTCTCCTGCCTCAGCCTCCC
AAGTAGCTG
...


No gene information available







ParameterValue
Mutation model: Mutation rate 5.42e-04
Mutation model: Beta 0.669
Mutation model: P(single step) 1.000
Constraint (Z-score) 0.000
Stutter model: up 0.009
Stutter model: down 0.006
Stutter model: p 0.764
See the about page for detailed description of each parameter.


Locus-level imputation metrics

ParameterValue
SSC - Concordance 0.53
SSC - r 0.70
1000 (EUR) - Concordance 0.55
1000G (EUR) - r 0.61
1000 (AFR) - Concordance 0.38
1000G (AFR) - r 0.22
1000 (EAS) - Concordance 0.39
1000G (EAS) - r 0.35

Allele-level imputation metrics

Allele (bp diff from hg19)r2P-val
-30 nan 1.000e+00
-20 nan 1.000e+00
-15 0.18 7.291e-43
-10 0.21 3.927e-50
-5 0.12 2.405e-29
0 0.09 6.992e-21
5 0.02 2.190e-06
10 0.14 6.668e-33
15 0.05 9.940e-13
20 0.06 3.417e-15
25 0.20 8.923e-48
30 0.04 6.724e-11
35 nan 1.000e+00
40 nan 1.000e+00
See the about page for detailed description of each parameter.