STR chr22:30363907-30363935

Repeat unit AC/GT repeats 14 times in the reference sequence.


...ACACAATATATGGCCTTTTGTGCCCCAGGTTCTCTCATTTAGCATAATGTTTTCATCTATGTGTGTCATGTATCAGTATTTTATTCCATTTTATTGCTGG
ATAACTCCATTATATATACT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTATTTTTTGTTTGTTTATCCATTCACATTTTGTTTGTCCATTCATTGATTGAT
GCATATTTGGGTTGTTTGCACTTTTGGCCATCATGAATAATGCTGTTACGAAAATTTGTGTAGAAGTT
...

No gene information available

Gene (ENS) Tissue Beta (SE) P-value CAVIAR
MTMR3 (ENSG00000100330.11) Cells-Transformedfibroblasts 0.31 (0.07) 3.58e-06 0.01
See the about page for a detailed description of each parameter.
No sequence data available.

Parameter Value
Mutation model: Mutation rate 2.55e-04
Mutation model: Beta 0.900
Mutation model: P(single step) 0.742
Constraint (Z-score) 0.794
Stutter model: up 0.004
Stutter model: down 0.027
Stutter model: p 0.972
See the about page for a detailed description of each parameter.

Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.97
SSC - r 0.98
1000 (EUR) - Concordance 0.98
1000G (EUR) - r 0.99
1000 (AFR) - Concordance 0.87
1000G (AFR) - r 0.27
1000 (EAS) - Concordance 0.98
1000G (EAS) - r 0.99

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-10 nan 1.000e+00
-6 0.99 0.000e+00
-4 nan 1.000e+00
-2 0.96 0.000e+00
0 0.92 0.000e+00
2 0.90 0.000e+00
4 0.87 0.000e+00
6 0.05 1.989e-11
8 0.44 5.477e-123
See the about page for a detailed description of each parameter.