STR chr20:19902494-19902529

Repeat unit AAAC/GTTT repeats 9 times in the reference sequence.


...AAGTGCTCCCAAGAGAAACGCATGGTGAAGTGGGGGTTGGAGCCTGGAGGGGAAAGAGATCAGAGATCAGAGGTCCAATATCAGGTGAAGTCCCCTAAGG
GTAAATTTGGATCTGTCGGT
TGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTTTGTGACAGGGTCTCTCTCTGTCACCCAGGCTGGAGTGCAGCGGCACAA
TCTCAGCTCACTGCAACCTCTGCCTCCTGGGTTCAAGCGATTCTGCTGCCTCAGCCTCCAGAACAGCTGAGATTA
...

No gene information available

No sequence data available.

Parameter Value
Mutation model: Mutation rate 1.10e-04
Mutation model: Beta 0.900
Mutation model: P(single step) 0.891
Constraint (Z-score) 0.119
Stutter model: up 0.000
Stutter model: down 0.002
Stutter model: p 0.813
See the about page for a detailed description of each parameter.

Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.94
SSC - r 0.92
1000 (EUR) - Concordance 0.98
1000G (EUR) - r 0.99
1000 (AFR) - Concordance 0.92
1000G (AFR) - r 0.90
1000 (EAS) - Concordance 0.79
1000G (EAS) - r 0.39

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-16 0.77 2.856e-309
-12 0.32 1.082e-81
-9 0.86 0.000e+00
-8 0.84 0.000e+00
-4 0.84 0.000e+00
0 0.87 0.000e+00
4 0.04 1.074e-09
See the about page for a detailed description of each parameter.