STR chr1:153900068-153900118

Repeat unit AC/GT repeats 25 times in the reference sequence.


...TGCAATGGTGCAATCTCGGCTCACTGCAACCTCTGCCTCTGGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAATTAGCTGGGACTACAGGCGGGTGCC
ACCACGCCCAGCTAATTTTT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTAGGAGAGACGGGGTTTCACTGTGTCAGC
CAGGTTGGTCTCGATCTCCTGACCTCGTGATCTGCCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCGCCCAGCC
...

No gene information available

No sequence data available.

Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.74
SSC - r 0.86
1000 (EUR) - Concordance 0.67
1000G (EUR) - r 0.80
1000 (AFR) - Concordance 0.50
1000G (AFR) - r 0.69
1000 (EAS) - Concordance 0.40
1000G (EAS) - r 0.62

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-22 nan 1.000e+00
-20 0.22 1.344e-53
-18 0.10 7.504e-23
-16 nan 1.000e+00
-14 0.76 2.863e-298
-12 0.11 1.128e-25
-10 0.46 7.817e-131
-8 0.68 1.970e-237
-6 0.61 6.181e-196
-4 0.32 5.630e-83
-2 0.54 5.055e-161
0 0.44 4.090e-121
2 0.17 1.627e-39
4 0.17 8.387e-41
6 0.31 1.813e-78
8 0.05 2.051e-12
10 nan 1.000e+00
12 0.25 5.124e-61
See the about page for a detailed description of each parameter.