STR chr19:17252977-17253000

Repeat unit A/T repeats 24 times in the reference sequence.


...TGCACCTGTGGTCCCAGCTATTTGGGAGGCTGAGGCAGGAGGATTGCTTGAGGCCACGAGGTCGAGGCTTGCAGTGAGCTATGATTACACCACTGGGCGA
CAGCAAGACCCTGCCTTTTA
AAAAAAAAAAAAGAAAGAAAAAAGAAGCGGCAACCAGACACAACAGGCCATAAGTGTATGACCTCATTGACCTGAGATAC
CCAGAACAGGCAAATCCATAGAGACAGGAAGCAGATTGGTGGTTGTCAGGGACTAGGGGAGGG
...

No gene information available

No sequence data available.

Parameter Value
Mutation model: Mutation rate 5.50e-05
Mutation model: Beta 0.394
Mutation model: P(single step) 0.846
Constraint (Z-score) 0.000
Stutter model: up 0.012
Stutter model: down 0.021
Stutter model: p 0.838
See the about page for a detailed description of each parameter.

Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.98
SSC - r 0.96
1000 (EUR) - Concordance 0.99
1000G (EUR) - r 0.95
1000 (AFR) - Concordance 0.90
1000G (AFR) - r 0.91
1000 (EAS) - Concordance 0.99
1000G (EAS) - r 0.99

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-4 nan 1.000e+00
0 0.93 0.000e+00
1 0.93 0.000e+00
2 0.91 0.000e+00
3 1.00 0.000e+00
See the about page for a detailed description of each parameter.