STR chr19:16201097-16201113

Repeat unit A/T repeats 17 times in the reference sequence.


...TGTAGTGGCGTGATCATAGCTCACTGCAGGCCCCAAACTCCTGGGCTTAAATAATCCTATCACCTCAGCTTCCTGAGTAGCTAGGACTTGCAGGCATGTG
CCACTACTCCAAAACTGTAT
TTTTTTTTTTTTTTTTATAGAGCACAGTCTATGTTGCCTAGGCTGGTCTTAAACTCCTGGCCTCAAGTGATCCTCCCACC
TTAGCCTCCCAAAGTGCTGGGATTACAGGCGTGGGCCACCGTGCCTGGCTAATTTT
...

No gene information available

No sequence data available.

Parameter Value
Mutation model: Mutation rate 1.35e-05
Mutation model: Beta 0.000
Mutation model: P(single step) 0.960
Constraint (Z-score) 0.000
Stutter model: up 0.039
Stutter model: down 0.077
Stutter model: p 0.929
See the about page for a detailed description of each parameter.

Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.99
SSC - r 0.94
1000 (EUR) - Concordance 0.98
1000G (EUR) - r 0.86
1000 (AFR) - Concordance 0.97
1000G (AFR) - r 0.94
1000 (EAS) - Concordance 0.99
1000G (EAS) - r 0.00

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-1 0.30 2.937e-75
0 0.89 0.000e+00
1 0.91 0.000e+00
See the about page for a detailed description of each parameter.