STR chr18:67536040-67536077

Repeat unit AC/GT repeats 19 times in the reference sequence.


...ATCTTTGACCTTTTATTAAATTGTGGTTCACAAGGCTTGCTATCTCACAACGTGCAGTTAACGTTCCCAACCAGGCCCAAATGCACGCACATGCACATGC
GCACACGTGCGCGTGCACGC
ACACACACACACACACACACAGACACACACATACACATTTAAATAAGCCTGGAGCATACAATGTGATGAAACAAAAGAGA
ACATGGAACTTAGAGTCAAATGATCTATGTTTAACTTGCACTCTGCAATTTACTAGCTGAGTTATTTATGTCTTTAA
...

No gene information available

No sequence data available.

Parameter Value
Mutation model: Mutation rate 1.15e-04
Mutation model: Beta 0.900
Mutation model: P(single step) 0.797
Constraint (Z-score) 0.652
Stutter model: up 0.003
Stutter model: down 0.043
Stutter model: p 0.904
See the about page for a detailed description of each parameter.

Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.96
SSC - r 0.96
1000 (EUR) - Concordance 0.97
1000G (EUR) - r 0.88
1000 (AFR) - Concordance 0.88
1000G (AFR) - r 0.79
1000 (EAS) - Concordance 0.93
1000G (EAS) - r 0.82

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-4 nan 1.000e+00
-2 0.98 0.000e+00
0 0.95 0.000e+00
2 0.85 0.000e+00
4 0.91 0.000e+00
6 0.88 0.000e+00
8 0.61 5.065e-196
10 nan 1.000e+00
See the about page for a detailed description of each parameter.