STR chr1:93858126-93858136

Repeat unit A/T repeats 11 times in the reference sequence.


...AGCTAGTTGATCTGTAATTCTATGATGGATATAAAATTTCTAAAATACTTAGATTCATTTTTTGTAAAATAAAAAGAGCAAAGTCACAGGTCTACTTTTA
AAGTTAGTATCTAAACTGCA
AAAAAAAAAATGTATTTTTTGTGAGGGCAGTCCATTGAGATTTGGGTTTGAAACATCTTTAGTTATAGCAAGCAGGCAGT
AGCAATCTGACAGACTTTTCTGGTTTATAGTTGGTGTGTCGCAAGGTTGT
...

No gene information available

Gene (ENS) Tissue Beta (SE) P-value CAVIAR
DR1 (ENSG00000117505.8) Muscle-Skeletal -0.21 (0.06) 2.67e-04 0.01
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No sequence data available.

Parameter Value
Mutation model: Mutation rate 1.16e-04
Mutation model: Beta 0.364
Mutation model: P(single step) 0.915
Constraint (Z-score) 0.000
Stutter model: up 0.007
Stutter model: down 0.015
Stutter model: p 0.938
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Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.99
SSC - r 1.00
1000 (EUR) - Concordance 0.99
1000G (EUR) - r 0.99
1000 (AFR) - Concordance 0.97
1000G (AFR) - r 0.94
1000 (EAS) - Concordance 1.00
1000G (EAS) - r 1.00

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-1 0.99 0.000e+00
0 0.97 0.000e+00
1 0.98 0.000e+00
2 0.50 2.964e-145
See the about page for a detailed description of each parameter.