STR chr16:67229794-67229850

Repeat unit AGC/GCT repeats 19 times in the reference sequence.


...ATCATTGTAGTGAGTGGCGGCCCTGGGACTGATAGCAAGGACAGTGGTGAGCTCAGTTCACTCCCACTGGGCCCAACAACACTGGACACCCGGCCACTGC
AGTCTTCTGCCCTGCTGGAC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGTAACAGCAGCAGTTCGTCCGGACCCAACCCTTCTAC
CTCCTTTGAGCCCATCAAGGCAGACCCCACAGGTGGTGAGTACCTGCCCCCTGGGGGCAGAGAGAGAGAGTCTAGCCTCAGTCCAGTCCTAGGTCA
...

No gene information available

Gene (ENS) Tissue Beta (SE) P-value CAVIAR
KIAA0895L (ENSG00000196123.8) Artery-Tibial -0.19 (0.06) 1.81e-03 0.00
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No sequence data available.

Parameter Value
Mutation model: Mutation rate 4.65e-05
Mutation model: Beta 0.318
Mutation model: P(single step) 0.700
Constraint (Z-score) -1.386
Stutter model: up 0.001
Stutter model: down 0.016
Stutter model: p 0.872
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Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.96
SSC - r 0.33
1000 (EUR) - Concordance 0.97
1000G (EUR) - r 0.90
1000 (AFR) - Concordance 0.78
1000G (AFR) - r 0.39
1000 (EAS) - Concordance 0.94
1000G (EAS) - r 0.00

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-18 0.36 1.940e-93
-15 0.00 8.844e-01
-12 0.00 9.269e-01
-9 nan 1.000e+00
-6 0.32 2.354e-81
-3 0.00 8.999e-01
0 0.32 3.654e-83
3 0.70 1.001e-249
6 nan 1.000e+00
9 0.16 3.614e-37
12 0.17 2.843e-39
15 0.12 2.451e-29
See the about page for a detailed description of each parameter.