STR chr15:89876820-89876860

Repeat unit AGC/GCT repeats 13 times in the reference sequence.


...AGGCATCTCCCCTCCTTGCCCGAAGATTTGCTCGTGCAGCCCTCTCGAGAGCATCTGGATGTCCAATGGGTTGTGCCGCAGCTGCCCGCCCTCCGAGGAT
AGCACTTGCGGCTGCTGAGG
CTGCTGTTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCCGCCGCCGCTGCCCGTCGCTGGGGTCGGACGCGGGGACGG
AGCTGGAGACCCAGCGCCCCGGAGCTGGAACCGGCCCTGGCCCGACGGTGGCGCCGGCCACCTTCCTCCAGAGCAGGCGG
...

No gene information available

No sequence data available.

Parameter Value
Mutation model: Mutation rate 1.30e-05
Mutation model: Beta 0.899
Mutation model: P(single step) 0.776
Constraint (Z-score) -2.180
Stutter model: up 0.001
Stutter model: down 0.009
Stutter model: p 0.852
See the about page for a detailed description of each parameter.

Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.97
SSC - r 0.84
1000 (EUR) - Concordance 0.96
1000G (EUR) - r 0.77
1000 (AFR) - Concordance 0.86
1000G (AFR) - r 0.78
1000 (EAS) - Concordance 0.94
1000G (EAS) - r 0.00

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-9 nan 1.000e+00
-6 0.79 4.941e-324
-3 0.48 1.354e-136
0 0.84 0.000e+00
3 0.84 0.000e+00
6 0.77 4.828e-306
9 0.16 4.359e-39
15 nan 1.000e+00
See the about page for a detailed description of each parameter.