STR chr1:57832716-57832797

Repeat unit AAAAT/ATTTT repeats 16 times in the reference sequence.


...GGCCAGGCACAGTGGCTCACACCTATAATCCCGACACTTTGGGAGGCAGAGGCAGGTGGACCACTTTAGCCCAGGAGTTCGAGACCAGCCTGGGCAACAC
AGTGAGACCCTGTCTCCACA
AAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAATAA
A
TTAGCCAGGCATGGTGCCATACATCTGTAATCCTAGTTACCTGGGAGGCTGACTTGGGAGGACCACTTCAGCCAGGGAGGCTGAGGCTGCAGTAAGCTG
TGATGGCACTACTGCACTTCA
...

No gene information available

No sequence data available.

Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.74
SSC - r 0.95
1000 (EUR) - Concordance 0.79
1000G (EUR) - r 0.96
1000 (AFR) - Concordance 0.50
1000G (AFR) - r 0.74
1000 (EAS) - Concordance 0.49
1000G (EAS) - r 0.34

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-40 0.90 0.000e+00
-35 0.89 0.000e+00
-30 0.32 2.117e-81
-25 0.43 1.341e-117
-20 0.47 1.805e-131
-15 0.45 4.661e-126
-10 0.52 3.611e-154
-5 0.45 4.563e-126
0 0.34 1.457e-86
4 nan 1.000e+00
5 0.35 3.655e-91
10 0.20 7.226e-48
15 0.06 4.388e-14
19 nan 1.000e+00
20 0.05 2.081e-11
24 1.00 0.000e+00
25 0.36 1.869e-93
30 0.32 1.869e-81
35 0.43 2.560e-118
See the about page for a detailed description of each parameter.