STR chr12:48487503-48487518

Repeat unit A/T repeats 16 times in the reference sequence.


...GCCAAATGAGATGTGAAAAAAAATTTTGGTTTTCAGAGGTTTTTGGATTTTGGAATTGCACATAAGGGACTGTGGATGTGCGTATCAATTCCATGAATTA
GAAATGAGCAGAAAATGATA
AAAAAAAAAAAAAAAGAACATGTTGACACATGAAAAACTATAACTATTAGCCTGGACAACATGGCGAAACTCCGTCTCTA
CCAAAAAATGCAAAAATTAGCTAGGCATGCTGGCATGCACTGGTAGTCCCAGCTA
...

No gene information available

No sequence data available.

Parameter Value
Mutation model: Mutation rate 1.06e-04
Mutation model: Beta 0.584
Mutation model: P(single step) 1.000
Constraint (Z-score) 0.000
Stutter model: up 0.029
Stutter model: down 0.062
Stutter model: p 0.920
See the about page for a detailed description of each parameter.

Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.98
SSC - r 0.98
1000 (EUR) - Concordance 0.95
1000G (EUR) - r 0.96
1000 (AFR) - Concordance 0.97
1000G (AFR) - r 0.98
1000 (EAS) - Concordance 1.00
1000G (EAS) - r 1.00

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-2 0.97 0.000e+00
-1 0.87 0.000e+00
0 0.97 0.000e+00
1 0.94 0.000e+00
2 0.42 4.136e-115
See the about page for a detailed description of each parameter.