STR chr11:119077000-119077033

Repeat unit CCG/CGG repeats 11 times in the reference sequence.


...CGCCTCCGGGACGCGCCCCGCCCGCCCCGGGCTCGCGCGCTCTGAAGGGGCGCGTCCCGCGCACTCCCGGCGCCGCCCACTCCCCTCCCCACGGCCGCTC
CTCCCTCCGCCCGGATAGCC
GGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCCGGGAGAGGCCCCTCCTTCACGCCCTGCTTCTCTCCCTCGCTCGCAG
TCGAGCCGAGCCGGCGGACCCGCCTGGGCTCCGACCCTGCCCAGGCCATGGCCGGCAACGTGAAGAAGAGCTC
...

No gene information available

No sequence data available.

Parameter Value
Mutation model: Mutation rate 6.96e-05
Mutation model: Beta 0.176
Mutation model: P(single step) 0.700
Constraint (Z-score) -0.490
Stutter model: up 0.001
Stutter model: down 0.007
Stutter model: p 0.916
See the about page for a detailed description of each parameter.

Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.90
SSC - r 0.75
1000 (EUR) - Concordance 0.92
1000G (EUR) - r 0.88
1000 (AFR) - Concordance 0.91
1000G (AFR) - r 0.85
1000 (EAS) - Concordance 0.70
1000G (EAS) - r 0.58

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-18 nan 1.000e+00
-12 nan 1.000e+00
-9 0.88 0.000e+00
-3 0.71 5.620e-256
0 0.83 0.000e+00
3 0.70 5.597e-251
6 0.60 2.751e-188
9 0.48 4.984e-137
12 0.23 9.295e-56
15 nan 1.000e+00
18 0.35 2.795e-90
21 0.00 8.069e-01
24 0.00 8.997e-01
27 0.00 8.901e-01
30 0.26 2.545e-65
33 nan 1.000e+00
36 0.00 9.267e-01
39 0.32 4.218e-81
42 0.00 8.842e-01
51 nan 1.000e+00
54 nan 1.000e+00
57 0.00 9.267e-01
60 nan 1.000e+00
See the about page for a detailed description of each parameter.