STR chr1:23817932-23817947

Repeat unit A/T repeats 16 times in the reference sequence.


...TTCCTGGCTTCCCTACCCAAAGTACCTATGCATACACACATGCACACACGCACGCACATGCACATGCACACACCTCTTCCTCATCTAAACTGGTGGCAAC
TTCCATTTTCTTCTTCTTCT
TTTTTTTTTTTTTTTGAGACAGAGTCTCACTGTGCTGCCCAGGCTGGAGTGCAATGGCATAATCTCGGCTCACTGCAACC
TCCGCCTCCCGGGTTCAAGCAATTCTCCTGCCTTAGCCTCCCGAATATCTGGGAT
...

No gene information available

No sequence data available.

Parameter Value
Mutation model: Mutation rate 1.13e-04
Mutation model: Beta 0.224
Mutation model: P(single step) 1.000
Constraint (Z-score) 0.000
Stutter model: up 0.031
Stutter model: down 0.035
Stutter model: p 0.809
See the about page for a detailed description of each parameter.

Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.99
SSC - r 0.99
1000 (EUR) - Concordance 0.99
1000G (EUR) - r 0.98
1000 (AFR) - Concordance 0.98
1000G (AFR) - r 0.95
1000 (EAS) - Concordance 1.00
1000G (EAS) - r 1.00

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-3 1.00 0.000e+00
-2 0.99 0.000e+00
-1 0.98 0.000e+00
0 0.94 0.000e+00
1 0.00 9.270e-01
See the about page for a detailed description of each parameter.