STR chr7:55955294-55955332

Motif CCG repeats 13 times in the reference sequence.


...GGCTGTCCTCAGAGCAGGTCTGGCGCGCCGGTGGCTGGACCGGCCCCAGGAGCCCAGTCACCGGGCGTCATTGGCTCAGGCTGCGGGGCCCTCGGCACCT
TCTCCCTCCCGGGTCCACCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGTCAGGGGGCGGAGCCTGCCGAAGCGCCCTTTGTCTGCGGAGG
TGAGTGCGCGCCGGGAGGAGGCGGAGGCGGGAGGCGGAGGCGGGGGGCGGAGGCGGGGGGCGGAGGCGGGGGGCGGAG...


No gene information available







ParameterValue
Mutation model: Mutation rate 4.26e-04
Mutation model: Beta 0.037
Mutation model: P(single step) 0.701
Constraint (Z-score) 1.296
Stutter model: up 0.002
Stutter model: down 0.008
Stutter model: p 0.815
See the about page for detailed description of each parameter.


Locus-level imputation metrics

ParameterValue
SSC - Concordance 0.91
SSC - r 0.90
1000 (EUR) - Concordance 0.96
1000G (EUR) - r 0.93
1000 (AFR) - Concordance 0.86
1000G (AFR) - r 0.85
1000 (EAS) - Concordance 0.84
1000G (EAS) - r 0.97

Allele-level imputation metrics

Allele (bp diff from hg19)r2P-val
-21 0.00 9.224e-01
-18 0.85 0.000e+00
-12 0.90 0.000e+00
-9 0.00 9.268e-01
-6 0.92 0.000e+00
-3 0.82 0.000e+00
0 0.83 0.000e+00
3 0.34 2.250e-86
6 0.72 1.669e-262
9 0.09 1.293e-21
12 0.05 1.925e-11
15 nan 1.000e+00
21 0.04 4.763e-10
24 0.62 1.777e-201
27 0.22 1.192e-52
30 0.00 9.182e-01
36 nan 1.000e+00
39 nan 1.000e+00
42 nan 1.000e+00
See the about page for detailed description of each parameter.