STR chr4:57724658-57724677

Repeat unit AT/AT repeats 10 times in the reference sequence.


...CTCAGGAAGCTGAGATAGGAGGATCACTTGAGCCCAGGAGGTTGTGGCTGCAATGAGTGAGCTGTGATCACACCACTGCATTCCATCCTGTGCGACAGAG
TGGGGGTGGGGGGAAGTTTTATATATATATATATATATACATGAAATCACTTCCAGACCTGGCCCATTAGAACTGCATGCCATTTAACCTTCCTGGATGA
AAGGAAGAAACATGACTCCCTGGACAATCTTGGGAGCTACTTTTTTTTTTTTTTTTGAG...

No gene information available

No sequence data available.

Parameter Value
Mutation model: Mutation rate 1.05e-05
Mutation model: Beta 0.000
Mutation model: P(single step) 0.700
Constraint (Z-score) -1.518
Stutter model: up 0.005
Stutter model: down 0.012
Stutter model: p 0.906
See the about page for a detailed description of each parameter.

Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.82
SSC - r 0.96
1000 (EUR) - Concordance 0.73
1000G (EUR) - r 0.96
1000 (AFR) - Concordance 0.43
1000G (AFR) - r 0.56
1000 (EAS) - Concordance 0.90
1000G (EAS) - r 0.94

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-8 0.96 0.000e+00
-4 0.36 1.240e-93
-2 nan 1.000e+00
0 0.91 0.000e+00
2 0.69 1.189e-244
4 0.13 7.424e-31
6 0.17 2.367e-39
10 nan 1.000e+00
12 0.74 4.631e-284
14 0.71 4.996e-256
16 0.44 8.663e-122
18 0.47 1.545e-134
20 0.24 3.002e-58
22 0.11 1.603e-26
24 0.22 2.429e-53
26 0.09 4.903e-22
28 0.08 6.270e-20
30 0.03 3.332e-08
32 0.42 1.775e-116
See the about page for a detailed description of each parameter.