STR chr3:183429965-183430014

Repeat unit AAAAT/ATTTT repeats 10 times in the reference sequence.


...TCCGCCTACCTTGCCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACTGCACCCGGCCTAAATTGTTATTTTTGTTTTAACTTTGAGTGAATACAAAA
TGAGTATTTTTGAGTTAGCA
TTTTATGTTCTTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTTTGAGACAGAGTCTCACCCTGTCTCCCAGGC
TGGAGTGCAGTGGTACAATCTCGGCTCACTGCAACCTGCCTTCTGGGTTCAAGCGATTCTCATGCCTCAGCGTCCTGAGTAGCTGGGAT
...

No gene information available

No sequence data available.

Parameter Value
Mutation model: Mutation rate 3.12e-05
Mutation model: Beta 0.900
Mutation model: P(single step) 0.750
Constraint (Z-score) 0.000
Stutter model: up 0.001
Stutter model: down 0.003
Stutter model: p 0.852
See the about page for a detailed description of each parameter.

Locus-level imputation metrics

Parameter Value
SSC - Concordance 0.94
SSC - r 0.95
1000 (EUR) - Concordance 0.97
1000G (EUR) - r 0.96
1000 (AFR) - Concordance 0.47
1000G (AFR) - r 0.76
1000 (EAS) - Concordance 0.76
1000G (EAS) - r 0.99

Allele-level imputation metrics

Allele (bp diff from hg19) r2 P-val
-20 nan 1.000e+00
-10 nan 1.000e+00
-5 nan 1.000e+00
0 0.85 0.000e+00
5 0.72 1.529e-263
10 0.91 0.000e+00
15 0.51 5.918e-150
20 0.75 1.581e-287
25 nan 1.000e+00
30 0.32 1.072e-80
35 0.79 4.941e-324
40 0.88 0.000e+00
See the about page for a detailed description of each parameter.